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[開學]106學年第1學期的課程看版開張了 歡迎同學問問題-20170917

作者 主題: [資訊]0301課程  (閱讀 380 次)

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[資訊]0301課程
« 於: 二月 28, 2017, 10:57:30 pm »
(1) FastQC: A quality control tool for high throughput sequence data.
     http://www.bioinformatics.babraham.ac.uk/projects/fastqc/

(2) STAR: Spliced Transcripts Alignment to a Reference
     https://github.com/alexdobin/STAR

(3) samtools: Tools for manipulating next-generation sequencing data
    https://github.com/samtools

(4) Ensemble Genome references
http://120.108.112.179/download/Homo_sapiens.GRCh38.dna.primary_assembly.fa.gz
http://120.108.112.179/download/Homo_sapiens.GRCh38.dna.chromosome.MT.fa.gz
http://120.108.112.179/download/Homo_sapiens.GRCh38.dna.chromosome.X.fa.gz
http://120.108.112.179/download/Homo_sapiens.GRCh38.87.gtf.gz

(5) Gencode Genome references
http://120.108.112.179/download/GRCh38.genome.fa.gz
http://120.108.112.179/download/gencode.v20.annotation.gtf.gz

(6) Ugene ugene-1.26.1-win-x86-64.exe
« 最後編輯時間: 三月 02, 2017, 07:49:43 pm 由 admin »
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